Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAIFAER-ALLPEG---WARNVRFEISADGVLAEIRPDANA----DGAERLGGAVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYR------MVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLYSHAGF-GGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAVTPQQIATVLAAGHD-DLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDGIFPATDFLAQGGRLGIGSDSHV---SLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQP-IGSLAVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHAG--EERSARAFVQVLGELLD |
| 3LS9 Chain:A ((1-451)) | MILIRGLTRVITFDDQERELEDADILI-DGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQL---ERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGA------TADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPADPNEP-----EKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWRLDGVDRVG--VHDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERIVANTTAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260725 for 3851 contacts (-67.7/contact) +
2D Compatibility (PS) -46217 + (NN) -18190 + (LL) 1140
1D Compatibility (HY) -13200 + (ID) 4200
Total energy: -341392.0 ( -88.65 by residue)
QMean score : 0.544
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