Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDGKPE---LRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
3H8Q Chain:A ((19-100))
---VVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLL--
General information:
TITO was launched using:
RESULT:
Template:
3H8Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61943 for 548 contacts (-113.0/contact) +
2D Compatibility (PS) -8839 + (NN) -6176 + (LL) 44
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -85414.0 ( -155.86 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_3H8Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H8Q-query.scw
PDB file :
Tito_Scwrl_3H8Q.pdb
: