Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTILVTGSAGFIGANFVLDWLALH-DEPVVSLDKLTYAGNRQNLASLDGDARHTFVAGDIGDSQLVARLLAEHQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRAYWGALEPEAKAAFRFLHVSTDEVYGSL-----------APSDPAFTENNRYEPNSPYSASKAASDHLVRAYHHTYGLPVLTTNCSNNYGPYHFPEKLIPLVIHNALAGKPLPIYGDGQQIRDWLYVKDHCSAIRRVLEAGQLGETYNVGGWNEKANLDVVETLCAILDQEQPRADGRSYREQITFVKDRPGHDRRYAIDATRLERELGWKPAET-FETGIRKTVRWYLDNQDWVANVTSGAYREWVGKQYA |
1KEP Chain:B ((7-328)) | --IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD-RVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE-KFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD---------HVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDW------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113707 for 2636 contacts (-43.1/contact) +
2D Compatibility (PS) -32797 + (NN) -16803 + (LL) 3044
1D Compatibility (HY) -24400 + (ID) 7850
Total energy: -192513.0 ( -73.03 by residue)
QMean score : 0.484
|
|
|