Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAR---EDAERTYAADRARLSQLLGVSP |
1GK4 Chain:A ((29-79)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------ANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5570 for 175 contacts (31.8/contact) +
2D Compatibility (PS) -5599 + (NN) -4416 + (LL) 10628
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 3383.0 ( 19.33 by residue)
QMean score : 0.731
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