Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAA-PAWEGYTNAD----GSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGS---MV-DGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQR--DF-TLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI-AQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 3VV5 Chain:A ((31-257)) | ------------------------------------EIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITE--ERARAVDFTN-PHYCTGGVIVSRKGG-PRTAKDLQGKVVGVQVGTTYMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERK-LENTLQVGELVFQ-ERVAMAVAKGN--KSLLDALNRALAELMQDGTYARISQKWFGEDV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63923 for 1711 contacts (-37.4/contact) +
2D Compatibility (PS) -23050 + (NN) -3988 + (LL) 2948
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -97113.0 ( -56.76 by residue)
QMean score : 0.470
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