Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLLVSLLLTLGLTGLAHAAGDAAAGQAKAAVCGACHGADGNSPAPNFPKLAGQGERYLLKQMHDIKDGKRTVLEMTGLLTNLSDQDLADIAAYFASQKMSVGMADPNLVAQGEALFRGGKIAEGMPACTGCHSPSGVGIATAGFPHLGGQHATYVAKQLTDFREGTRTNDGDTKIMQSIAAKLSNKDIAAISSYIQGLH |
4O1W Chain:C ((1-79)) | ---------------------GDAAAGKAKSVMCAACHGAAGVSAVPTYPNLAGQKEAYLTKQLNDFKSGKRNDPTMKGMVMALSPADMENLAAYYANMK----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11911 for 546 contacts (-21.8/contact) +
2D Compatibility (PS) -9056 + (NN) -9200 + (LL) 6936
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -30931.0 ( -56.65 by residue)
QMean score : 0.648
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