Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGLGPGGGDSEGGPRPLFCRKGALRQKVVHEVKSHKFTARFFKQPTFCSHCTDFIWGIGKQGLQCQVCSFVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGVDHTERRGRLQLEIRAPTSDEIHITVGEARNLIPMDPNGLSDPYVKLKLIPDPRNLTKQKTKTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSELLKAPVDGWYKLLNQEEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPSPTDSKRCFFGASPGRLHISDFSFLMVLGKGSFGKVMLAERRGS-DELYAIKILKKDVIVQDDDVDCTLVEKRVLALGGRGPGGRPHFLTQLHSTFQTPD-RLYFVMEYVTGGDLMYHIQQL-GKFKEPHAAFYAAEIAIGLFFLHNQ-GIIYRDLKLDNVMLD-AEGHIKITDFGMCKENVFPGSTTR--TFCGTPDYIAPEIIA---YQPYGKSVDWWSFGVLLYEMLAG-QPPFDGEDEEELFQAIMEQTVTYP-KSLSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWID---WERLERLEIAPPFRPRPCGRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFVHPDARSPTSPVPVPVM |
1CDK Chain:A ((8-350)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H--LDQ------------------------------------------------------------------------------------------FERIKTLGT----------------------------------------G--SFGRVMLVKHKETG-NHFAMKILDKQKVVKLKQIEHTLNEKRILQAV---NFPFLVKLEYSFKDN----SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILSKGY---NKAVDWWALGVLIYEMAAGY-PPFFADQPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI------NEKCGKEFSEF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134930 for 2634 contacts (-51.2/contact) +
2D Compatibility (PS) -35512 + (NN) -18418 + (LL) 16376
1D Compatibility (HY) -25200 + (ID) 5550
Total energy: -203234.0 ( -77.16 by residue)
QMean score : 0.202
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