Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVCALVLVARRR-RRGATACLVLNLFCADLLFIS-AIPLVLAVRW-TEAWLLGPVACHLLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRG---PGRRARAVLLALIWGYSAVAALPLCVFFRVVPQRLPGADQEISICTLIWPTIPGEISWDVSFVTLNFLVPGLVIVISYSKILQTSEHLLDARAVVTHSEITK---AS-R-------------KR---------------L--------------------------------------------------------------------------T---------V----SLA------------YSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWPSLFFWVVAFTFANSALNPILYNMT--LCRNEWKKIFCCFWFPEKGAILTDTSVKRNDLSIISG |
| 3PBL Chain:A ((41-472)) | ------------------------------------------YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT--------GDPTVCSISNP------DFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTC---HVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292768 for 2101 contacts (-139.3/contact) +
2D Compatibility (PS) -29272 + (NN) -3832 + (LL) 4620
1D Compatibility (HY) -18800 + (ID) 2800
Total energy: -342852.0 ( -163.19 by residue)
QMean score : 0.275
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