Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMSFLHIVFSILV-------VVAFILGNFANGFIALINFIAWVKRQKISSAD-------QIIAALAVSRVGLLWVILLHWYSTVLNPTSSNLKVIIFISNAWAVTNHFSIWLATSLSIFYLLKIVNFSRLIFHHLKRKAKSVVLVIVLGSLFFLVCHLVMKHTYINVWTEECEGNVTWKIKLRNAMHLSNLTVAMLANLIPFTLTLISFLLLIYSLCKHLKKMQLHGKGSQDPSTKIHIKALQTVTSFLILLAIYFLCLIISFWNFKMRPKEIVLMLCQAFGIIYPSFHSFILIWGNKTLKQTFLSVLWQVTCWAKGQNQSTP |
2CVH Chain:A ((1-220)) | MLSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEGGFSPERLVQMAETRG--------------LNPEEALSRFILFTPSDF-----------------------KEQRRVIGSLKKTVDSNFALVVVDSI---------TAHYRA---EENRSG----LIAELSRQLQVLLWIARKHNIP--------VIVIN---------QVHFDSRTEMTKPVAEQTLGYRCKDILRLDKLP------------KPGLRVAVLER---------HRF---------RPEGLMAYFRIT--ERG-IEDVE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -194691 for 1622 contacts (-120.0/contact) +
2D Compatibility (PS) -21923 + (NN) -6582 + (LL) 11112
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -221034.0 ( -136.27 by residue)
QMean score : 0.197
|
|
|