Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MITFLPIIFSILIVVTFVIGNFANGFIALVNSIEWFKRQKISFADQILTALAVSRVGLLWVLVLNWYATELNPAFNSIEVRITAYNVWA----------VINHFSNWLATSLSIFYLLKIANFSNLIFLHLKRRVKSVVLVILLGPLLFLVCHLFVINMNQIIWTKEYEGNMTWKIKLRSAMYLSNTTVTILANLVPFTLTLISFLLLICSLCKHLKKMQLHGKGSQD---PSMKVHIKALQTVTSFLLLCAIYFLSIIMSVWSFESLENKPVFMFCEAIAFSYPSTHPFILIWGNKKLKQTFLSVLWHVRYWVKGEKPSSS |
| 1QH5 Chain:A ((1-260)) | MKVEVLPALTD---NYMYLVIDDETKEAAIVDPVQ---------PQKVVDAARKHGVKLTTVLTTHHHWDHAG-GNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGC-----------GKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFM---------------------------------------RVREKTVQQHAGETDPVTTMRAVRREKDQFKMPRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306036 for 2131 contacts (-143.6/contact) +
2D Compatibility (PS) -26525 + (NN) -5133 + (LL) 6588
1D Compatibility (HY) 3200 + (ID) 1850
Total energy: -329756.0 ( -154.74 by residue)
QMean score : 0.294
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