Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASL-INEFKLYSVF-RGIEATRNVTEHFRKKR---SEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLP-----------KT--KMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS |
2LNL Chain:A ((38-322)) | ----NKYVVIIAYALVFLLSLLGNSLVMLVILYS---RVGRSVTDVYLLNLALADLLFALTL-PIWAAS-KVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVH---ATRTL-TQK-RHLVKF----VCLGCWGLSMNLSLPFFL--FRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM--------------GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192852 for 1929 contacts (-100.0/contact) +
2D Compatibility (PS) -26470 + (NN) -498 + (LL) 2384
1D Compatibility (HY) -24800 + (ID) 2400
Total energy: -244636.0 ( -126.82 by residue)
QMean score : 0.200
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