Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASKDFAIGMILLSQIMVGFLGNFFLLYHYSFLCFTRGMLQSTDLILKHLTIANSLVILSKGIPQTMAAFGLKDSLSDIGCKFVFYVHRVGRAVCVGNACLLSVFQVITISPSEFRWAELKLHAHKYIRSFILVLCWILNTLVNITVLLHVTGKWNSINSTKTNDYGYCSGGSRSRIPHSLHIVLLSSLDVLCLGLMTLASGSMVFILHRHKQQVQHIHGTNLSARSSPESRVTQSILVLVSTLCYFTRSPPSLHMSLFPNPSWWLLNTSALITACFPMVSPFVLMSRHPRIPRLGSACCGRNPQFPKLVR- |
1POI Chain:B ((1-260)) | -DYTNYTNKEMQAVTIAKQIKNG-------------------------------QVVTVGTGLPLIGASVAKRVYAPDCHIIVESGLMDCSPVEVPRSVGDLRFMAHCGCIWPNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVNSTSIGDYHHPKTRFTG-----SGGANGIATYSNTIIMMQHEKRRFMNKIDYVTSP--------------GWIDGPGGRERLGLPGDVGPQLVVTDKGILKFDEKTKRMYLAAYYPTSSPEDVLENTG-FDLDVSKAVELEAPDPAVIKLIREEIDPGQAFIQVP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1POI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -237765 for 2178 contacts (-109.2/contact) +
2D Compatibility (PS) -27749 + (NN) -9340 + (LL) 4920
1D Compatibility (HY) 5200 + (ID) 1200
Total energy: -265934.0 ( -122.10 by residue)
QMean score : 0.223
|
|
|