Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQYIGNE-D-FIEHKILGLSSKDL-CVYIEKQDNDEMVCHHSKYGMMMEKKYLESIFKVG-NQEI-NDFIDIANLRAKECFFI------SNQKTSYTNRDYIIKEAVESNFDVLSQYNDIKSIFFDKESVNKMVSEMKKFNLRSSRAAKEEILDNFNSKVVSLDSILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTLYPKQK-F-DLDSLSIK |
| 2R8R Chain:A ((3-211)) | ARGRLKVFLGAA----------------------------PGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGRAETEALLNG----LPQQPLLRTEYRGMTLEEMD--LDALLKAAPSLVLVDELAHTNAPGSRHTKRWQDIQELLAAGIDVYTTVN-VQHL----ESLNDQVRGITGVQVRET--------------------------------LPDWVLQEAFDLVLIDLPPRELLERLRDGKVYVPEQARAAIDAFFTQTNLTALR----EMAMQTAAAQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57436 for 1458 contacts (-39.4/contact) +
2D Compatibility (PS) -20036 + (NN) 3135 + (LL) 5860
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -72177.0 ( -49.50 by residue)
QMean score : 0.220
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