Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYTGGDKREKQCFSSVDSNYNHTIKRQNFEIMKTIGTLIQEGSKLLSSHKVESPYLDCEIIMQHVLDVERSFIIMNYADQVSIKKEQLFWKLTKKRAERYPISQIIGNREFWSKNFIVNRHVLDPRADSEILVSAALKYYPNKKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNLLGRAKMFPSSWTEC----KGLFDLIISNPPYIRRDKLKDLQAEVQKEPKIALDGGIDGLSCYLSIFPILKRCLKK-NGFAILEIGEDQN-DIDKIVPSYELAFQEYMYDLAGMKRCIVIKRT |
| 1NV8 Chain:A ((14-282)) | ---------------------------------RKIWSLIRDCSGKLEGV-TETSVLEVLLIVSRVLGIRKEDLFLK-DLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRK-YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSA--HLPKDVLFEPPEALFGGEDGLDFYREFFG----RYDTSGKIVLMEIGEDQVEELKKIVSD-----TVFLKDSAGKYRFLLLNRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -104033 for 2093 contacts (-49.7/contact) +
2D Compatibility (PS) -27244 + (NN) -5249 + (LL) 3532
1D Compatibility (HY) -20400 + (ID) 4200
Total energy: -157594.0 ( -75.30 by residue)
QMean score : 0.454
|
|
|