Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQDEIRLIIDELIRIIPFEGISDKTLLKVCTDLNLANSF--CKFQNGIYSALECIVEDLNSSMEAELRNFN-LEDMKVQEQIKLAVQICLSNYATLPNYREFLKNILSFSVLPKNIYFSSKLLCRIVDMIWYGIHDQSTDFNYYTKRAILAGVYLSIILFFINDYSEGFADTLSFLDRCINNVMTFQKFKIHLKEIVGSFL |
2GFN Chain:A ((8-100)) | --DERRRALADAVLALIAREGISAVTTRAVAEESGWSTGVLNHYFGSR-HELLLAALRRAGDIQGDRYRTILDEEGAGPIEKLRNITASILPLDERRLAMTRVFLFFYAEGTARGEIAAFLARWRGVVRESVVAAQREGTVSTDLDADAVTVALVALTDGLALQAILDPVVMKAISAEDAAARCVDAAVRR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36838 for 523 contacts (-70.4/contact) +
2D Compatibility (PS) -9416 + (NN) -3870 + (LL) 1264
1D Compatibility (HY) 1600 + (ID) 750
Total energy: -48010.0 ( -91.80 by residue)
QMean score : 0.486
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