Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHLFCFG-YGYVARFLSKKLLSLSWKVSGTSRNQDVHNTNFFNYDKVN--KDTFQ--DVTHVLVSIPPDGD-D-----------ALERYGHY----FQNTKWLGYLSAASVYGDHAGNWVKEESETKPIESRGKSRLRAEKKWLNSKLPVHIFRLTGIYGPGRNVLVDLQ---LNKARNVQKEGHFFSRIHVEDISNILFSSMQNIKPGEIYNCADDLPATQSEVVAYAAELLNVSVPEPVEISSLPDH-AQSFYLGSKKVSNIKVKRDLGISLVYPNYKVGLENLISNQQAPIERGE |
| 1VL0 Chain:A ((13-292)) | MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------DLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPC-TT-EEFPRPAKRPKYSVLRNYMLELTTGDIT-R-EWKESLKEYIDLLQM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92223 for 2134 contacts (-43.2/contact) +
2D Compatibility (PS) -27536 + (NN) -10870 + (LL) 868
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -136011.0 ( -63.74 by residue)
QMean score : 0.387
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