Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MISLLLVVLLFFCGD--DAFAKQEPRSIAADS---HIKVINYNPQAIHKYTGFYGYQSSILFEPGETIQNLSMGDPTGWQLVPQGNRLFIKPI-DD-IADTNATVITNKRVYYFELH---AEEATGLDDPRLAYEVRFLYPLFSSDEIYTTNNGDILEQANPTT-IPDINDIEVVKKGIN-FNYSISHVKGSQSIIPTKAFDDGRFTYLQFNKVNSDFPAVFMVDSAGYESLVNFRTVDDYLIIERVGSVFTL-RNGSSTVCLFNENMPFAKGKR--- |
| 4GL6 Chain:A ((5-241)) | EISIKIETYLQEEYGEEFEVLSWNQPKLLPSDNGAIYATCISKNDPK-HPFEGSYFNPE----EPNSEIEIIYDG---------YGQRLLAKQ-MESMIEEAISQAAEN---YYIQGDIIIPEEWQDIPVEEISQWKNYVDLCNQSNSDYKTL-GSAWVYIDASTMKGKTDEEEY-----QMYEEVYRDKLGGQALLYVYYLD-----HKSFEKAEKILE----IFTSGDEG-SNFEDII-----EGQPYFGTIMRYGSDK---FDDNLEIFKAAKQGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GL6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13824 for 1543 contacts (-9.0/contact) +
2D Compatibility (PS) -22730 + (NN) -4435 + (LL) 3600
1D Compatibility (HY) -3200 + (ID) 2300
Total energy: -42889.0 ( -27.80 by residue)
QMean score : 0.093
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