Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------MQNIIHPNLEKSINNWFETQFNSLTLPFYNSID--LRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELM-RSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLF---HNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEF---------CSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSG---EEILTLNKKKRHKMKKIKEGIEVN---SVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNSTNCKFYDVSQVVENKTLSLWGTVSKLAVLALAVEMRSFHI------------------ |
2AQ4 Chain:A ((1-434)) | KRIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKDTYIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIPDTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKR--------YTLDALKASVGSKLGMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEMKSLYRTLGCPPMELRGLALQFNKLVDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70052 for 2699 contacts (-26.0/contact) +
2D Compatibility (PS) -38210 + (NN) 9249 + (LL) 552
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -105961.0 ( -39.26 by residue)
QMean score : 0.110
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