Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLV--APRQFEVTYNNVD-IYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPMSLIHEGVGEVVFDSKG--VFNKGTKVVMVPNTPTEKDDVIAENYLKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYT-ELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHF-S-FVDDVFFIN---------KIPEGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEF-PVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEYEIATINDLTEAFEADLSTSWGKTVLKWIM |
| 3UOG Chain:A ((26-363)) | KWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL---DLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGH--LRAGDRVVVQGTGGVALFGLQIAKA-TG-AEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVD-RL----GLKPVIDMRYK---FTEVPEALAHLDRGPFGKVVIEF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195161 for 2823 contacts (-69.1/contact) +
2D Compatibility (PS) -34591 + (NN) -11498 + (LL) 1800
1D Compatibility (HY) -3600 + (ID) 2900
Total energy: -245950.0 ( -87.12 by residue)
QMean score : 0.395
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