Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIMLTGATGHLGTHITNQAIA-NHIDHFHIGVRNVEKVPD---------DWRGK-VSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQ-HN-----NPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKP-Y---LPELMNMHKLIYPA-GDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGY--SYDMKELAAILSEASGTEIKYEPVSLETFAEMYD---EPKGFGALLASMYHAGARGL--LDQES----NDFKQLVNDQPQTLQSFLQENI |
| 2GAS Chain:A ((5-317)) | NKILILGPTGAIGRHIVWASIKAG-NPT-YALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRL-----LIEDQVKIIKAIKEAGNVKKFF-PSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQ--IKGDAVYEIDPAKDIEASEAYPDVTYTTADEYLNQF- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183482 for 2155 contacts (-85.1/contact) +
2D Compatibility (PS) -28888 + (NN) -11871 + (LL) 556
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -234485.0 ( -108.81 by residue)
QMean score : 0.561
|
|
|