Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEIIVYTQNDCPPCTFVKNYLNEHQIDFEERNIN-NQQYRNEM---ID-FD---------------------------------------AFSTPFILLNGNPMYHVDLDEINKVLNIQD
3F0I Chain:A ((3-119))
AMSVVIYHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNEVRAMMRCKEELYKELNLGDSQLSDDALFAAMAEHPKLIERPIVVCNGQARHGRPPEQVLEIL----
General information:
TITO was launched using:
RESULT:
Template:
3F0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52553 for 499 contacts (-105.3/contact) +
2D Compatibility (PS) -7570 + (NN) -740 + (LL) 168
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -65145.0 ( -130.55 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_3F0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0I-query.scw
PDB file :
Tito_Scwrl_3F0I.pdb
: