Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDEIAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDDVFNNKHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIESKQTIEYLAQVQHIRD
1Y7U Chain:A ((11-174))
------KGKTANESRVFKTSRVFPTDLNDHNTLFGGKILSEMDMVASISASRHSRKECVTASMDWVDFLHPVRSSDCVSYESFVIWTGRTSMEVFVKVVSEYLISGEKRIAATSFVTFVALSKENNPVPVPRVIPDTEEEKESHRIAVLRAEQRHIRKAESKKVATLLTF------
General information:
TITO was launched using:
RESULT:
Template:
1Y7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78595 for 1227 contacts (-64.1/contact) +
2D Compatibility (PS) -17524 + (NN) -767 + (LL) 908
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -110328.0 ( -89.92 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7U-query.scw
PDB file :
Tito_Scwrl_1Y7U.pdb
: