Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ------------KDFVNYIVEEVNQKEVDMVLIGGDLVDENI-E---KVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLN--TLDMTIL-GNECVHL----G-GINLCGVYDYFARKRQ--------DFAPDIDKALKK-RDSSKPTILLAHQPKQIRS--------LKESHSIDLVLSGHTHAGQIFPF-SLLVKLAQTYLHGLYKH-SGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 3THO Chain:B ((1-250)) | ------------------------------------------------------------------------------------------------------------------------------------------------MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNQDWKGLK-LFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES---KNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGREIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYYKKIDT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103734 for 1540 contacts (-67.4/contact) +
2D Compatibility (PS) -20701 + (NN) -4302 + (LL) 12652
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -127935.0 ( -83.07 by residue)
QMean score : 0.300
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