Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGVYIISLKESQRRLDTEKLVLESNEKFKGRCVF-----QIFDAISPKHQDFEKLLQELYNAQSLLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKLDQPVVILEDDVTLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDHSFKN-----------NPILEKFKKFFDVSRF--LNLSTHKVIHYILKK-----IQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATESFKIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHS--LDSTIQKPQKKSLKS------YPLPPQKSTFKNLFYYSLNAKKRLNAFQQYSKQYAPLKTPKEV |
| 1RZM Chain:A ((1-338)) | ----MIVVLKPGSTEEDIRKVVKLAESYNLKCHISKGQERTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCSVEG----REMLMETAHFLSELGVKVLRG-GAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIA-----NSGNTKIILCERGIRTFEKAT---------RNTLDISAVPIIRKESHLPILVDPS-HSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLD-FELFKELVQEMKKLADALGVKVN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122139 for 2461 contacts (-49.6/contact) +
2D Compatibility (PS) -32292 + (NN) -3643 + (LL) 2436
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -162288.0 ( -65.94 by residue)
QMean score : 0.191
|
|
|