Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFEPYPFERLRALFKEI-TPKKKGLDLGIGEPRFETPKFIQDALKSHTH-SLNIYPKSAFEESLREAQRGFFKRRFKIELKENELVSTLGSREVLFNFPSFVLFDYPNPTIAYPNPFYQIYEGSAQFARAKSLLMPLVKENDF--T-PSLNEKELQEVDLVILNSPNNPTGRTLSLEELIAWVKLALKHDFILINDECYSEIYENTPPSSLLEACMLADNGAFKNVLVIHSLSKRSSAPGLRSGFIAGDSSLLEKYKAFRTYLGYTSANAIQKASEVAWLD----DRHAEFFRNIYANNLKLARKIFKE----TLIYPYSFYAYLPVKD----GENFAKTLYQNEGITTLPALYLGRNHIGADYVRLALVYDTSLLEKPLEIIEAYRENYA |
| 1B5P Chain:A ((15-382)) | ------ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE--VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPG-------RVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAER-LLEAGVAVVPGTDFAA----FGHVRLSYATSEENLRKALERFARVL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134806 for 3076 contacts (-43.8/contact) +
2D Compatibility (PS) -37770 + (NN) -19452 + (LL) 1548
1D Compatibility (HY) -8000 + (ID) 3900
Total energy: -202380.0 ( -65.79 by residue)
QMean score : 0.438
|
|
|