Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVDHLISPFRDKRIILALSNEIKKFASKLTKKLVIMEVCGGHTHSIMKYGLLDLMPKNLEFAHGPGCPVCVMPRARLDEAYELASMKD----SIVLSLGDMMRVP-GSYGSLIQAREKGLDARFLYSPMQALEIAKENPHKKVIYIAIGF---ETTTPMTASVLLNAKKEKLKNLFF--HINHI-------LVPPSVS-TILEDKACRINA---------------LLAPSHVSVISGAQIYAPLVDRFKLPIIVSGFEP-------VDILES----VLMLTKQALNKEA-----KLEIQYKRAVSYEGNTK-AQELVNACMEVRENFEWRGLGNIKRSA-------LKLKEAFASYDAEKV---FKAYLSHKTSKENKACKCGEILKGIA-----------KPLDCSLFATTCTPQN---PIGSCMVSSEGACAAYYRYKRV |
| 2ZB6 Chain:A ((12-462)) | VAAEELMNALSKGN--CSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEKPN-----LSQLSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKI-KIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPRFKVSPYLFTVPIKEAGGDC-HAPTYLPAEVDGDVKLSSNLVILPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58398 for 2513 contacts (-23.2/contact) +
2D Compatibility (PS) -36106 + (NN) 16348 + (LL) 1708
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -96248.0 ( -38.30 by residue)
QMean score : 0.098
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