Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVSSINQFDSNLYGLLNAKSAPKEDLAPIEGAEKIEREKKDAPTENLPFNPDKRETYGFLVLELMSDREYEAFLRATAGMDESQKRLAAQSLYSLTDFYNGKFSKEVENAPKQPVNGLHKKAFQTFNATNHNAFLQRYQNAYNNPSSMDVVL |
| 2KVV Chain:A ((1-78)) | ----------------------------------------------------------------MAQIIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEGVHFKRVSPSGEKT-----LRGTTWYNYPEINKFIRDSLEHHHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9527 for 416 contacts (22.9/contact) +
2D Compatibility (PS) -8320 + (NN) -4039 + (LL) 4312
1D Compatibility (HY) -800 + (ID) 500
Total energy: 180.0 ( 0.43 by residue)
QMean score : 0.164
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