Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDA-IYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPV-KTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAE------------NDMIKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGK-N------GYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 2QED Chain:A ((7-229)) | -------------------------------SMNLNSIPAFQDNYIWVLTNDEGRCVIVDPGEAA---PVLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQDK--------------GATHLVGDGDTIRVLGEKFTLFATPGHT-------LGHVCYFS----RPYLFCGDTLFSGGCGRLFEGTPSQMYQSLMKINSLPDDTLICCAHEYTLA-NIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKIN-LFLRTEDI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29517 for 1732 contacts (-17.0/contact) +
2D Compatibility (PS) -21636 + (NN) -8110 + (LL) 4932
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -64031.0 ( -36.97 by residue)
QMean score : 0.458
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