Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMT---RVMSVFGDVTS----PVRGAFLV----------WSVVSGVFFVLALPAIYQSV--VKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLIVSLLSAGVYGLARIPAVNDLPVLDKIGFCQRISFFFNYLPIVVFGIDRIRKP
4Q7O Chain:A ((4-136))
-----MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYHYFNIAISDFLIAHPEYQKKCKEIQKTY---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114348 for 827 contacts (-138.3/contact) +
2D Compatibility (PS) -11612 + (NN) 3630 + (LL) 7340
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -121840.0 ( -147.33 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: