Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKLTVGGKFDWYIDTLEKSGMFILELSNEEIETFIFEDFIVGVTSFFSKNNLSELKANEIIDEDMEKNAYLLREKVLKIDNTDLWNINSVRQSSEWLDIFRRSDELKRQLKERWSDEEIEYLKTL------------ |
| 1COZ Chain:A ((1-126)) | MKKVITYGTFD----LLHWGHIKLLERAKQ-----LGDYLVVAIST---DEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRTEGISTTKIKEEI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1COZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 12099 for 847 contacts (14.3/contact) +
2D Compatibility (PS) -11469 + (NN) 1783 + (LL) 1208
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -479.0 ( -0.57 by residue)
QMean score : 0.226
|
|
|