Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTN-RYHLPFILERDNIEVKTIYNRNP-KTATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYG----VTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLT-YVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3FHL Chain:A ((5-346)) | IIKTGLAAFGMSGQVF-HAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLVEYESTFARYRNF------------GLTYNLGSHLIDQAIQLFGMPEAVFADLGILREGGKVDDYFIIHLLHPSLAPNVKITLKASYLMREAEPRFALHGTLGSYVKYGV---------------PNWGEESEQEWGLLHTEING--KEICRKYPGIAGNYGGFYQNIYEHLCLGQPLETHAQDILNVIRIIEAAYQSHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153381 for 2496 contacts (-61.5/contact) +
2D Compatibility (PS) -33491 + (NN) -12941 + (LL) 2092
1D Compatibility (HY) -20400 + (ID) 5050
Total energy: -223171.0 ( -89.41 by residue)
QMean score : 0.487
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