Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTD--KEITIITNSLDVINFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVMNSDILEYEIK-RHMMEKATAKFLLVDHTKVDKSALLTYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV |
1M0S Chain:A ((4-127)) | ---------------------------------------------------------------------------LEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALGTIKDKIQGAVAASKESEELLRK-QGIEVFNAND-------------------VSSLDIYVDGADEINPQKMM-IKGGGAALTREKIVAALAKKFICIVDSSKQVDVLG------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53415 for 944 contacts (-56.6/contact) +
2D Compatibility (PS) -12952 + (NN) 283 + (LL) 9072
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -59512.0 ( -63.04 by residue)
QMean score : 0.419
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