Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQETL-DGLECCIVALTGKISVSEG---DHVFSEIGTRANVFEKIPTDSVFISGGRAFQVKADAEKARVALCYSPADR-N------------LPTTLI------KASDNSI---------------------EQRGKYQ-NKRLVH---------------NILPDVSE-VASSLLVVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEG-YHPVGVPDGYDSYYLNVMAGPKRVWEFHNDPDHEWILERD |
| 1J58 Chain:A ((76-338)) | -----------------------------SENLASVNMRLKPGAIRELHWHKEAE-WAYMIYGSARVTIVDEKGRSF--I----DDVGE--GDLWYFPSGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIADSTNFKVSKTIASALVTVEPG--AMRELHWHPNTH--------EWQYY-I---SGKARMTVFASDGH-ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J58.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95208 for 1428 contacts (-66.7/contact) +
2D Compatibility (PS) -21903 + (NN) -4412 + (LL) 3732
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -123891.0 ( -86.76 by residue)
QMean score : 0.382
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