Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLNEENSFYNVDLLNLLKDSSEAVLPYKRIRFRRNQQILAEGAETDYFYIIEDGVVSMSKN-TCKEDSIINFLGKQECIGPLTLLGGA--KSPVNYTTISEVSVYQFERKYVLNKFLSSPDVFWQMNALMQSMVTPMLERE-GYVNLPSSEKVLAGLIACGERFGRIESDGSCLIPYYFTQKILGNYLNLARAYVATNLRKLEEDGIIALSPKPWRVNNFEIHKQKLKENHEPYI
3LA7 Chain:A ((30-234))
------------ANVFRQMATGA---FPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCA-DGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHK----------------
General information:
TITO was launched using:
RESULT:
Template:
3LA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112135 for 1522 contacts (-73.7/contact) +
2D Compatibility (PS) -21387 + (NN) -9807 + (LL) 2360
1D Compatibility (HY) -10800 + (ID) 1700
Total energy: -153469.0 ( -100.83 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3LA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA7-query.scw
PDB file :
Tito_Scwrl_3LA7.pdb
: