Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKQSADKRR-IEK-NDKPFFYLADTVWSAFTNIDLTDWAYYLKVRKEQGFNVLQINILPQWDRSVLKKIQEPFGINEGFFDLKAKNEAYFKHAEKMLEMAVNQGFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQFE---PI-YIISGDTDFPT----------E---TVTDYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNSEHQSMAY-------------TLAEH--FSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSGAIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILANDLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFVSLDDYAIDLEQGKKVSLAKILHEEKTEIQMTPFLKDSLYVIHK |
| 1G01 Chain:A ((20-269)) | --LVELNGQLTLAGEDGTPVQLRGMSTHGLQWFGEIVNENAFVALSNDWGSNMIRLAMYIGE---------N----------GYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGD---------PRADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMIL-VGNPNWSQRPD-LSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAVFATEWGTS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90404 for 1694 contacts (-53.4/contact) +
2D Compatibility (PS) -23293 + (NN) -12257 + (LL) 14428
1D Compatibility (HY) 2400 + (ID) 1050
Total energy: -110176.0 ( -65.04 by residue)
QMean score : 0.311
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