Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAALQILD--EEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQ--PFSRAIEIKEACYGATAGINLAKDYVAKHP--DSKVLVIGSDIARYGLATGGEATQGAGAVAMVIAADPRCITLED-DNVFYTEDIMDFWRPVY-SEYACVEGKYSTEQYIHFFQTIWEKY------SAKFGKNLEDFAAICFHLPYTKMGKKA-LDTII-------------------------E-------TAP----SDVQEKLLENYRLSTLYSRNVGNIYTGSLYLSFISLLDNQPD-LQAEDKIGFFSYGSGAVGEFFHGVLQPDYKK-----YIRKDEHAELLANRTKLAIPDYETKFKQQLPKDGS-IFEVDP-----ASDPAAIVLTGIQ-EHKRQYIKK |
| 2F82 Chain:A ((3-451)) | KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEG-PARPTGGAAAIAMLIGPDAP-IVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNK-HSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEVDSLYRRFYGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176798 for 3409 contacts (-51.9/contact) +
2D Compatibility (PS) -40771 + (NN) -8001 + (LL) -32
1D Compatibility (HY) -20400 + (ID) 5250
Total energy: -251252.0 ( -73.70 by residue)
QMean score : 0.452
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