Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDGALKATCLEELEHGGRILEFSYEGIF-YEVLE--------QLGEMPLPPY---------IKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTE----ESAERINKIK-AQGGKVVAVGTTSIRTLETIASR--HDGKLVAES--------GWTEIFISP-GYTFQAVD---ALITNFHLPKST----------LIMLVSALSDRTKILAAYNHAVEEQYRFFSF-GDAMFIH |
| 4CI2 Chain:B ((71-451)) | --MINFDTSLPTSHMYLGSDMEEFHGR---------TLHDDDSCQVIPVLPHVMVMLIPG-QTLPLQLFH-----PQEVSMVRNLIQKDRTFAVLAYSNVRER---EAHFGTTAEIYAYREEQEYGIETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPSTMSAVQLQSLSRRHIRAFRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPTNPIDFSYRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCGPMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWKFTATKKDMSPQKFWGLTRSALLPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67168 for 2269 contacts (-29.6/contact) +
2D Compatibility (PS) -32890 + (NN) 2306 + (LL) 1352
1D Compatibility (HY) -6800 + (ID) 2500
Total energy: -105700.0 ( -46.58 by residue)
QMean score : 0.138
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