Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKVPASFNKWIEKVKTTFPENEKLHRMFEKCFTNTYTTTLQE--TEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEM-ATVIENLVKLQTKCILHDPYANAFNKSANGAGFQNDKTAMTNLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEFRKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPSDDACMYGYLVPSNMFLVVVMDYVQEIAATFYPEDKELPKESSDLRKEVAAGIETYAKQVHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAATYLGFCEKTDPAYQATRKLILSRENPYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLT-AETEAEKQAILE--MLIAGDGGTDYMHEGVNASNPAE-----FTRD-WFAWSNAMFSEFVLSLCGVYVKGSPLSK |
| 2OKX Chain:A ((541-882)) | --------------------CSDALLNATWEISR-HTTRLCMEDTFVDCPSY-E-----QVFWVGDSRNEALVNYYVFG-ETEIVERCLNLVPGSADE----TPL---YL---------DQ--VPSA--W-SSVIPNWTFFWILACREYAAHTGNEAFAARIW-PAVKHTLTHYLEHIDD--SGLLNM-----------AGWNLLD--------W---APIDQ-PNEGIVTHQNLFLVKALRDSRALAAAAG--ATEEADAFAARADLLAETINAVLWDEEKR---AYIDCIHADGRRS--DVYSMQTQVVAYLCGVAQGE--R-EAVIEGYLSSPPPA-----------FVQ--IGSPFMSFFYYEALEKAGRQTLMLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106941 for 2927 contacts (-36.5/contact) +
2D Compatibility (PS) -34969 + (NN) -15328 + (LL) 5128
1D Compatibility (HY) -2800 + (ID) 2450
Total energy: -157360.0 ( -53.76 by residue)
QMean score : 0.437
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