Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MKLKEGIFFKIVICFVT------------IFICLTPLSTSVSAHASVNREDGKEGNTLEQTVSVDKENPDLFVNQSVENNGPKRLFANQTESGGSKYKFVTKQTVSLAAA-------------NNIYSLAFLAAGGALGRVAKSTIAAAA----------SSIVG-------------GGASLLKKYNYMRQTIYKYSTKKEDKY---KVINEYLYTKNGKPGKITTS-----------YSTVRK---------------- |
| 1T8H Chain:A ((4-275)) | MPDIFQQEARGWLRCGAPPFAGAVAGLTTKHGGESKGPFASLNMGLHVGDDRTDVVNNRRRLAEWLAFPLERWVCCEQVHGADIQKVTKSDRG-NGAQDFATAVPGVDGLYTDEAGVLLALCFADCVPIYFVAPSAGLVGLAHAGWRGTAGGIAGHMVWLWQTREHIAPSDIYVAIGPAIGPCCYTVDDRVVDSLRPTLPPESPLPWRETSPGQYALDLKEANRLQLLAAGVPNSHIYVSERCTSCEEALFFSHRRDRGTTGRMLAFIGRREE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3207 for 1267 contacts (-2.5/contact) +
2D Compatibility (PS) -19429 + (NN) -4558 + (LL) -140
1D Compatibility (HY) 800 + (ID) 1350
Total energy: -27884.0 ( -22.01 by residue)
QMean score : 0.159
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