Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCSTKEMRLVYRDFLLQANQENKQITVLEADLSSSMSTNVLASEFGKRYINLGIMEAEMVGLAAGLAIKGYKPYLHTFGPFASRRVFDQVFLSLGYSQLSATIIGSDAGVSAEMNGGTHMPFEELGLLRLIPKATIFEVSDDIQFEAILKQTLSIDGLKYIRTIRKAPTAVYE-GCEDFSKGF-IQLRQGKDIALVASGIMVSRAIEAADYLKELGIEASVIDLFKIKPLPEELKPLLI--DQSIVTIENHNRIGGIGSALCEWLSMEKD-TTVSRMGIDERFGQVGQMKYLLEEYGLAVKDIVEHCKSIYKS |
| 2O1X Chain:A ((321-623)) | ----AYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIYSTFL-QRAYDQVLHDVAIEHLNVTFCIDRAGIV-GADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQTHDGPFAIRYPRGNTAQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNARFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNLHPTVRVLGIPDEFQEHATAESVHARAGIDAPAIRTVLAELGVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170066 for 2733 contacts (-62.2/contact) +
2D Compatibility (PS) -32651 + (NN) -10506 + (LL) 764
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -226859.0 ( -83.01 by residue)
QMean score : 0.492
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