Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKTKFSDPLEQLAKKRKRKTLFKTVVLALITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTGKVHADRFKDIDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDRGT------RQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIAITFDKSYSYKEIKTMIPNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGANIEYKPYYKLDKE |
2W69 Chain:A ((7-203)) | --------------------------------------------------------AMEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEVCFMYSDFHFINEQGESIVVELDDPNALKHRFEIIEGRDRTMAWTVVNSICNTTGAEK---PKFLPDLYDYKENRFIEIGVTRREVHIYYLEKA---NKIKSTHIHIFSFTG---EEMATKADYTLDEESRARIKTRLFTIRQEMANRGL--WDSFRQSER------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38039 for 1345 contacts (28.3/contact) +
2D Compatibility (PS) -19318 + (NN) 880 + (LL) 9780
1D Compatibility (HY) -1200 + (ID) 1550
Total energy: 26631.0 ( 19.80 by residue)
QMean score : 0.202
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