Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKFKERFDTLSDAILAIAMTILVLEIKTP-ATMGDIGDFTRNIGLFIVSFVVVFNFWYERAQNSLDAQKTNDEIIALDIIEHLGICLIPLFTKFMISFENHNFAVMAYGLLTLLVGLTSDIIRIRLASYDLVTIPSELKERVIKVMTTFAIRSVVVRFIIIILAYFLPEVGIFAYLVIPLFMFWRRSRAGKYYAKKGIEAPSYIKLFIQIGERAPEDFTNSSSGIGGVKRLYKK |
3PBP Chain:C ((9-33)) | --------------------GFKVVEVGLAMNTKKQIGDFFKNLNM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PBP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -942 for 85 contacts (-11.1/contact) +
2D Compatibility (PS) -2337 + (NN) 2077 + (LL) 19520
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 15918.0 ( 187.27 by residue)
QMean score : 0.121
|
|
|