Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNEFYNQLINSEPIGFIDPFTDLGEFDSIQMKFKQPVRNLVNKYSGKPYNLSWQNKIEQ-MRV-LYIKYQKSLKLEDEEQEVHNRVKNKKSKKYVHEIVTTYLKLGFRFKEIEARVSLFNTRLRRNWKRSDYVTTDNPEFYLKKDLQNGYCSPNSFLPRSMKIN- |
| 2XL4 Chain:A ((26-172)) | -------RPKLSTKDLALIK--ADLAEFEARELSSEKILKDTIKEESWSDLDFA-NDNINQMIGTMK--RYQQEIL---SIDAIKRASEASADTEAFKKIFKEWSE--FKIERIQVTIDLLN---GKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12753 for 981 contacts (13.0/contact) +
2D Compatibility (PS) -14821 + (NN) 1515 + (LL) 1740
1D Compatibility (HY) -7600 + (ID) 1000
Total energy: -7413.0 ( -7.56 by residue)
QMean score : 0.125
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