Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRN----GSWEKYDNLDFLN------RVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGENANVKNLFTGTRALNANFNDDKSSMVYYENEVANYIKKTNHHVRYRVTPLFKNVELVARGVRIEAQSIEDETISFDVYIFNGQP------------GYDIDYLTGSSEKIMITK------ |
| 4WMY Chain:A ((24-306)) | CSSSPSLPRSCKEIKDECPSAFD--GLYFLRTENGVIYQTFCDMT--SGGGGWTLVASVHENDMRGKCTVGDRWSSQQGSKAVYPEGDGNWANYNTFGSAEAATSDDYKNPGYYDIQAKDLGIWHVPNKSPMQHWRNSSLLRYRTDTGFLQTLGHNLFGIYQK-----YPVKYGEGKCWTDNGPVIPVVYDFGDAQKTASYYSPYGQREFTA--GFVQFRVFNNERAANALCAGMRVTGCNTEHHCIGGGGYFPEASPQQCGDFSGFDWSGYGTHVGYSSSREITEAAVLLFYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 45217 for 2080 contacts (21.7/contact) +
2D Compatibility (PS) -25520 + (NN) 3900 + (LL) 412
1D Compatibility (HY) 4000 + (ID) 2050
Total energy: 25959.0 ( 12.48 by residue)
QMean score : 0.062
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