Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDNRFAQLKENFEKGSPKRRVPTSRPIAAQKAPESYNKKGRYPFSLHQDVRYDKLEALVAYHGAKSASDYLERLIVQEWEKMQRKLKNKEK-
1UMQ Chain:A ((22-81))
------------------------------LAKGESLPPPPENPMS-ADRVRWEHIQRIYEMCD-RNVSETARRL-NMHRRTLQRILAKRSPR
General information:
TITO was launched using:
RESULT:
Template:
1UMQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 407 for 315 contacts (1.3/contact) +
2D Compatibility (PS) -6480 + (NN) -5076 + (LL) 2140
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -12009.0 ( -38.12 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1UMQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UMQ-query.scw
PDB file :
Tito_Scwrl_1UMQ.pdb
: