Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
1TH7 Chain:A ((5-42))
-----------------------------------------------------------------------------------FLAETAHK---VLAESLNNLVLVKLKG----NKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVI
General information:
TITO was launched using:
RESULT:
Template:
1TH7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9470 for 153 contacts (-61.9/contact) +
2D Compatibility (PS) -4163 + (NN) -2011 + (LL) 6548
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -10796.0 ( -70.56 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_1TH7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TH7-query.scw
PDB file :
Tito_Scwrl_1TH7.pdb
: