Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYRHFHEK---NANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPKYEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNAPATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHVYPIYP--IEEAKTAQYQMIDIINKTP |
| 3FAK Chain:A ((56-307)) | ---------------------------------------------------------------------------------DIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARD----QGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLNGA-DAKHPYASPNFANLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142366 for 2313 contacts (-61.6/contact) +
2D Compatibility (PS) -26456 + (NN) -15609 + (LL) 5608
1D Compatibility (HY) -10800 + (ID) 3100
Total energy: -192723.0 ( -83.32 by residue)
QMean score : 0.594
|
|
|