Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKISQYNKWSIRRLKVGAASVMIASGSIVALGQSHIVSADEMSQPKTTITAPTANTSTNVESSTDKALSKVTTMETSSEMPKMQNMAKVEKTSDKPMMVATS-------VRKMMATPTPVAMTKTTSVDEVKKSTDTAFK-----QTVDVPAHYVNAAKGNGPFLAGVNQTIPYEAFGGDGMLTRLILKSSEGAKWSDNG---------VDKNSPLLPLKGLTKGKYFYQVSLNGNTTGKEGQALLDQIKANDK--HSYQATIRVYGAKDGKVDLKNMISQKMVTINIPHITTDMEVKNSLKMAFKEKVDVPAKYVSAAKAKGPFLAGVNETIPYEAFGGDGMLTRLILKASEGAKWSDNGVDKNSPLLPLKDLTKGKYFYQVSLNGNTAGKKGQALLDQIKANGSHTYQATITIYGTKDGKVDMNTILGQKTVMIHINVAKKDMNSTSMMMKKDKMTMPMKKEMTSSKINTGMMMSNNKMSANMQMSSQAKSNDKAGKKMSMMSKNLPNTGETKQQNVGVLGMLSLAFATGLTALGLKKSKQR |
| 1SHY Chain:B ((40-564)) | KYQLPNFTAETPIQNVILHEHHIFLGA-----TNYIYVLNEEDLQKVAEYKTGPVLEHPDCFPCQDCSSKAN----LSGGVWKDNINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVHCIFSPQIEEPSQCPDCVVSALGAKVLSSVKDRFINFFVGNTINSSYFPDHPLHSISVRRLKETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLTVQRETLDAQTFHTRIIRFCSINSGLHSYMEMPLECILTKEVFNILQAAYVSKPGAQLARQIGASLNDDILFGVFAQSKPDSAEPMDRSAMCAFPIKYVNDFFNKINVRC--------LQHFYGPNHEHCFNRDEYRTEFTTALQRVDLFM---------GQFSEVLLTSISTFIKGD--LTIANLGTSEG------------RFMQVVVSRSGPSTPHVNFLLDSHPVSPEVIVEHTLNQNGYTLVITGKKITKIPLNGLGCRHFQSCSQCLSAPPFVQCGWCHDKCVRSEECLSGTWTQQICLPA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 115359 for 3725 contacts (31.0/contact) +
2D Compatibility (PS) -48773 + (NN) 5900 + (LL) 3412
1D Compatibility (HY) -1600 + (ID) 2050
Total energy: 72248.0 ( 19.40 by residue)
QMean score : 0.160
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