Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQENKTAIFDNVSKLALKAGRAPESVHIVAVTKY----VNCQTTEALI-RTGVNHIGENRVDKFLEKYQA-LKDEKLTWHLIGSLQRRKVKDVINYVDYFHALDSVKLAAEIQKR---AQKPVKCFLQVNISREDSKHGFTIEQIDDALN---LISRYDKIELIGIMTMAPLKATKE--EISSIFEETESLRKRLQARNIERMPFTELSMGMSRDYDIAIQNGSTFVRIGTSFFK |
| 1XFC Chain:A ((14-235)) | --AMVDLGAIEHNVRVLREHAG----HAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGIT--APVLAWLHPPG-IDFGPALLA-DVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGL--NRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHM-----PDDSINDVQAQRFTAFLAQARE-QG--VRFEVAHLSNSSATMARPDLTFDLVRPGIAVYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103287 for 1633 contacts (-63.2/contact) +
2D Compatibility (PS) -21906 + (NN) -8079 + (LL) 1284
1D Compatibility (HY) 400 + (ID) 1600
Total energy: -133188.0 ( -81.56 by residue)
QMean score : 0.515
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