Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIKKEGRLGIYYYEQGFSVRTNKVIYDRN-YSSFWES-TLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSF--QEAREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELGLSRPYL--DIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYML----KSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKETPQRALEIAMATFKYKHTIQGDINIMTR-DDIAYLIEKETNDIKR |
| 3KTN Chain:A ((2-334)) | SLKIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGI-RPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRR--------DLVELLGFIPREDLEGEAQETELIQRFMSQYNLE-----WFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEHPNIDLIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134416 for 2707 contacts (-49.7/contact) +
2D Compatibility (PS) -35051 + (NN) -13711 + (LL) 1552
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -203576.0 ( -75.20 by residue)
QMean score : 0.490
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